Package org.snpsift.lang.expression
Class FieldNmd
- java.lang.Object
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- org.snpsift.lang.expression.Expression
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- org.snpsift.lang.expression.Field
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- org.snpsift.lang.expression.FieldSub
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- org.snpsift.lang.expression.FieldLof
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- org.snpsift.lang.expression.FieldNmd
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public class FieldNmd extends FieldLof
A NMD field form SnpEff: E.g.: 'NMD[2].GENE'- Author:
- pablocingolani
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Field Summary
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Fields inherited from class org.snpsift.lang.expression.Field
exceptionIfNotFound, name, number, returnType, TYPE_ALL, TYPE_ANY, vcfInfo, vcfInfoNumber
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Fields inherited from class org.snpsift.lang.expression.Expression
debug, negated, operator
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Constructor Summary
Constructors Constructor Description FieldNmd(java.lang.String name, Expression indexExpr)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description protected void
init()
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Methods inherited from class org.snpsift.lang.expression.FieldLof
getFieldString, getName, getReturnType, toString
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Methods inherited from class org.snpsift.lang.expression.FieldSub
evalIndex, evalIndex, evalIndex, evalIndex, getFieldString, isSub
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Methods inherited from class org.snpsift.lang.expression.Field
eval, eval, fieldHeaderNotFound, fieldNotFound, getReturnType, getSampleNum, gtFieldNotFound, indexStr, isSampleName, returnType, returnType, setExceptionIfNotFound
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Methods inherited from class org.snpsift.lang.expression.Expression
setNegated
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Constructor Detail
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FieldNmd
public FieldNmd(java.lang.String name, Expression indexExpr)
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