Uses of Class
org.snpsift.lang.function.Function
-
Packages that use Function Package Description org.snpsift.lang org.snpsift.lang.function -
-
Uses of Function in org.snpsift.lang
Methods in org.snpsift.lang that return Function Modifier and Type Method Description Function
LangFactory. expressionSetFactory(org.antlr.v4.runtime.tree.ParseTree tree)
Create FunctionBoolSet from ASTFunction
LangFactory. functionFactory(org.antlr.v4.runtime.tree.ParseTree tree)
Create functionFunction
LangFactory. functionVcfEntryFactory(org.antlr.v4.runtime.tree.ParseTree tree)
Create Functions from tree Note: These functions that are calculated on the whole VcfEntry. -
Uses of Function in org.snpsift.lang.function
Subclasses of Function in org.snpsift.lang.function Modifier and Type Class Description class
CountHet
Count number of heterozygous samplesclass
CountHom
Count number of homozygous samplesclass
CountRef
Count number of refernces samplesclass
CountVariant
Count number of ALT samplesclass
FunctionBoolGenotype
A function that returns a bool type (i.e.class
In
Is an expression in a set?class
IsHet
Is 'genotypeNum' heterozygous?class
IsHom
Is 'genotypeNum' homozygous?class
IsRef
Is 'genotypeNum' reference?class
IsVariant
Is 'genotypeNum' reference?
-